X-ray Crystallography Core Laboratory

Software Documentation

Program Function Main Executable
CCP4 suite Phasing, refinement ccp4i
CNS Phasing, refinement cns
COOT Model building coot
d*TREK Data processing dtprocess
EPMR Molecular replacement epmr
HKL-2000 Data processing HKL2000
O Model building ono
PHENIX Phasing, refinement phenix
PYMOL Molecular graphics pymol
REPLACE Molecular replacement glrf, tf
SHARP Phasing, automated model building run-sharp
SHELX Phasing, refinement, small molecule phasing shelxpro
Shake-n-Bake Heavy atom search, small molecule phasing SnB
SOLVE Phasing solve
Uppsala programs Manipulation of data, maps, coordinates, etc. dataman, mapman, moleman2
WARP Automated model building, solvent building ccp4i
WHATCHECK Structure validation whatcheck